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  1. UGENE
  2. UGENE-3949

Opening a FASTQ file after trimming it by quality

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    Details

    • Type: Bug
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: 1.15.1
    • Fix Version/s: 1.16
    • Component/s: Workflow
    • Labels:
      None
    • Tests Type:
      Functional/Unit
    • Affect Type:
      Userdefined

      Description

      1. Open a FASTQ file with FASTQC
      2. Input the file to "Raw DNA-Seq processing" pipeline
      3. Open an output FASTQ file that was trimmed by quality with FASTQC
        Expected state: the file can be opened successfully, the FASTQC report of the second file is better (or at least the same) than the report of the first file.
        Current state: the second file can't be opened, an error appears like: 
        File format error: Midline 'GGGG..GGA' didn't start with '+'

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            Assignee:
            vaskin Yura Vaskin
            Reporter:
            oigl Olga Golosova
            Assigned Tester:
            German Grekhov
            Watchers:
            2 Start watching this issue

              Dates

              Created:
              Updated:
              Resolved: