Minor Currently, UGENE can't find the index if it and the assembly have next names:
example.bam example.bai
The expected name is "example.bam.bai", but samtools can work with "example.bai" name. UGENE should be able to work with that name too.
Currently, UGENE can't find the index if it and the assembly have next names:
example.bam example.bai
The expected name is "example.bam.bai", but samtools can work with "example.bai" name. UGENE should be able to work with that name too.
