Uploaded image for project: 'UGENE'
  1. UGENE
  2. UGENE-4339

Crash on short reads alignment on cancelling on 40%

    XMLWordPrintable

    Details

    • Type: Bug
    • Status: Closed
    • Priority: Blocker
    • Resolution: Fixed
    • Affects Version/s: 1.16.2
    • Fix Version/s: 1.17
    • Component/s: NGS
    • Labels:
    • Story Points:
      3
    • Tests Type:
      Manual scenario
    • Sprint:
      DEV-24/06/2015
    • Affect Type:
      Userdefined

      Description

      1. {Tools->Align to reference->Align short reads}

        Expected state: "Align Sequencing Reads" dialog appeared

      2. Select "UGENE Genome Aligner" method in the dialog
      3. Set reference sequence: "_common_data/bwa/NC_000021.gbk.fa"
      4. Short reads: "_common_data/bwa/nrsf-chr21.fastq"
      5. Press "Start"
      6. Wait until GenomeAlignerFindTask is on 40% and cancel the top task
        Current state: UGENE crashes

        Attachments

          Issue Links

          relates to

          Bug - A problem which impairs or prevents the functions of the product. UGENE-3978 Crash on short reads alignment

          • Critical - Crashes, loss of data, severe memory leak.
          • Closed

            Activity

              People

              Assignee:
              ggrekhov German Grekhov
              Reporter:
              epushkova Eugenia Pushkova [X] (Inactive)
              Assigned Tester:
              Aleksey Tiunov [X] (Inactive)
              Watchers:
              2 Start watching this issue

                Dates

                Created:
                Updated:
                Resolved: