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  1. UGENE
  2. UGENE-5882

Online installer: "RefSeq reference data (for Kraken and CLARK)" group

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    Details

    • Type: New Feature
    • Status: Closed
    • Priority: Blocker
    • Resolution: Fixed
    • Affects Version/s: 1.28
    • Fix Version/s: 1.31
    • Component/s: Basic-Other, NGS
    • Labels:
    • Environment:

      Linux, Mac OS X

    • Story Points:
      2
    • Epic Link:
    • Sprint:
      DEV-29-2, DEV-29-3
    • Affect Type:
      Userdefined

      Description

      The issue should be done for the Universal package on 64-bit Linux and Mac OS X.

      On the "Select Components" page of the "Unipro UGENE Installer Setup" wizard add the "RefSeq reference data (for Kraken and CLARK)" group according to the specification. The item should have a checkbox.

      The group has the following sub-items with check boxes:

      • Bacterial genomes
      • Viral genomes
      • GRCh38 human genome

      RefSeq data
      See links 7-9 in the links table in the "Data Downloading" chapter of the Stage I specification.

      Installation folder
      Unpack the data, downloaded with the online installer to "bacteria", "viral" and "human" subfolders of the "data/ngs_classification/refseq" subfolder of the UGENE installation folder.

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              Assignee:
              atiunov Aleksey Tiunov [X] (Inactive)
              Reporter:
              oigl Olga Golosova
              Assigned Tester:
              Dmitrii Sukhomlinov
              Watchers:
              2 Start watching this issue

                Dates

                Created:
                Updated:
                Resolved: