#!/usr/bin/make -f

export DH_OPTIONS

UPSTREAM_NAME=ugene
UPSTREAM_VERSION=$(shell uscan --dehs | sed -n 's/.*<upstream-version>\(.*\)<\/upstream-version>.*/\1/p')
UPSTREAM_FOLDER=$(UPSTREAM_NAME)-$(UPSTREAM_VERSION)

get-orig-source:
	uscan --force-download --no-symlink
	tar -xzf ../$(UPSTREAM_NAME)-$(UPSTREAM_VERSION).tar.gz  
	rm -rf $(UPSTREAM_FOLDER)/installer/linux 
	rm -rf $(UPSTREAM_FOLDER)/installer/macosx 
	rm -rf $(UPSTREAM_FOLDER)/installer/windows 
	rm -rf $(UPSTREAM_FOLDER)/src/libs_3rdparty/zlib
	GZIP="-9" tar -czf ../$(UPSTREAM_NAME)_$(UPSTREAM_VERSION)+repack.orig.tar.gz $(UPSTREAM_FOLDER) 
	rm -rf $(UPSTREAM_FOLDER) 


build: build-arch build-indep

build-arch: build-arch-stamp
build-arch-stamp:
	qmake-qt4 -r UGENE_EXCLUDE_LIST_ENABLED=1 UGENE_USE_BUNDLED_ZLIB=1 DEFINES+='UGENE_VERSION_SUFFIX=\\\"-ppa\\\"'
	$(MAKE) -j 8
	touch $@

build-indep: build-indep-stamp
build-indep-stamp:
	touch $@

clean: 
	dh_testdir
	dh_testroot
	rm -f build-arch-stamp build-indep-stamp
	[ ! -f Makefile ] || $(MAKE) distclean
	dh_clean

install: install-indep install-arch
install-indep:
	dh_testdir
	dh_testroot
	dh_clean -k -i
	dh_install -i data /usr/share/ugene

install-arch:
	dh_testdir
	dh_testroot
	dh_clean -k -s
	dh_installdirs -s
##Create ugene package
	$(MAKE) INSTALL_ROOT=$$(pwd)/debian/ugene install
	rm -rf debian/ugene/usr/share/ugene
	rm debian/ugene/usr/lib/ugene/plugins/psipred.plugin
	rm debian/ugene/usr/lib/ugene/plugins/psipred.license
	rm debian/ugene/usr/lib/ugene/plugins/libpsipred.so
	rm debian/ugene/usr/lib/ugene/plugins/phylip.plugin
	rm debian/ugene/usr/lib/ugene/plugins/phylip.license
	rm debian/ugene/usr/lib/ugene/plugins/libphylip.so
##Create ugene-non-free package
	$(MAKE) INSTALL_ROOT=$$(pwd)/debian/ugene-non-free sub-src-plugins_3rdparty-psipred-install_subtargets sub-src-plugins_3rdparty-phylip-install_subtargets install_plugins
	rm debian/ugene-non-free/usr/lib/ugene/plugins/annotator.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/annotator.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/api_tests.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/api_tests.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/ball.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/ball.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/biostruct3d_view.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/biostruct3d_view.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/browser_support.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/browser_support.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/chroma_view.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/chroma_view.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/circular_view.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/circular_view.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/dbi_bam.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/dbi_bam.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/dna_export.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/dna_export.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/dna_flexibility.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/dna_flexibility.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/dna_graphpack.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/dna_graphpack.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/dna_stat.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/dna_stat.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/dotplot.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/dotplot.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/enzymes.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/enzymes.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/expert_discovery.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/expert_discovery.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/external_tool_support.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/external_tool_support.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/genome_aligner.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/genome_aligner.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/gor4.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/gor4.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/hmm2.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/hmm2.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/hmm3.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/hmm3.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/kalign.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/kalign.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/linkdata_support.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/linkdata_support.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/opencl_support.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/opencl_support.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/orf_marker.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/orf_marker.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/primer3.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/primer3.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/ptools.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/ptools.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/query_designer.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/query_designer.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/remote_blast.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/remote_blast.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/remote_service.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/remote_service.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/repeat_finder.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/repeat_finder.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/sitecon.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/sitecon.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/smith_waterman.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/smith_waterman.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/snp_effect.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/snp_effect.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/umuscle.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/umuscle.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/variants.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/variants.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/weight_matrix.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/weight_matrix.plugin
	rm debian/ugene-non-free/usr/lib/ugene/plugins/workflow_designer.license
	rm debian/ugene-non-free/usr/lib/ugene/plugins/workflow_designer.plugin

	rm -rf debian/ugene-non-free/usr/share/ugene


binary-common:
	dh_testdir
	dh_testroot
	dh_installchangelogs debian/changelog
	dh_installdocs
	dh_strip
	dh_compress
	dh_fixperms
	dh_installdeb
	export LD_LIBRARY_PATH=$$(pwd)/debian/ugene/usr/lib/ugene:$$(pwd)/debian/ugene/usr/lib64/ugene && dh_shlibdeps
	dh_gencontrol
	dh_md5sums
	dh_builddeb

binary-indep: build-indep install-indep
	$(MAKE) -f debian/rules DH_OPTIONS=-i binary-common

binary-arch: build-arch install-arch
	$(MAKE) -f debian/rules DH_OPTIONS=-s binary-common

binary: binary-arch binary-indep
.PHONY: build clean binary-indep binary-arch binary install install-indep install-arch