[UGENE-3434] Exporting Sequence View image improvements Created: 26/Aug/14  Updated: 17/Nov/19  Resolved: 01/Sep/15

Status: Closed
Project: UGENE
Component/s: None
Affects Version/s: 1.14
Fix Version/s: 1.18

Type: Improvement Priority: Critical
Reporter: Olga Golosova Assignee: Eugenia Pushkova [X] (Inactive)
Resolution: Fixed  
Labels: GUI2.0_seq, minor_voting, prerelease, publication_quality
Remaining Estimate: Not Specified
Time Spent: Not Specified
Original Estimate: Not Specified

Attachments: PNG File 3434.png     PNG File cropped.png     PNG File layout1.png     PNG File layout2.png     PNG File layout3.png     PNG File modal.png     PNG File selection.png    
Issue Links:
Duplicate
is duplicated by UGENE-3021 Export only the selected region when ... Closed
Relates
relates to UGENE-4554 Graphs: export as image Closed
relates to UGENE-4592 Export sequence image: support PDF Closed
Story Points: 5
Assigned Tester: Denis Kandrov
Tests Type: GUI automatic
Sprint: DEV-15/07/2015, DEV-05/08/2015
User Requests Number: 2
Affect Type: Userdefined

 Description   

Improve exporting of the Sequence View as follows:
1. Add a combo box "Area" with the following values:

  • Currently viewed
  • Zoomed annotations
  • Sequence details

2. Allow a user to specify a region if "Zoomed annotations" or "Sequence details" is selected.
3. Specify an image resolution and width/height for raster formats.
4. Export annotations as objects when exporting to vector format SVG.

See also:



 Comments   
Comment by Eugenia Pushkova [X] (Inactive) [ 16/Jul/15 ]

Dear tester,
please, pay attention to the following:

  • 32k image size limit
  • 200Mb SVG file boundary
  • export of sub-sequence from the middle of the sequence
  • custom rulers in Zoom View
  • export if ALL rows from Zoom View
Comment by German Grekhov [ 20/Jul/15 ]

Testing 1:

  1. Layout is wrong (attached layout1.png and layout2.png).
  2. Layout changes bad on radio buttons click.
  3. Dialog is not modal (modal.png).
  4. Zoomed annotations: export 1 character region -> assert.
  5. Zoomed annotations: export small region [1:2] for an unzoomed sequence -> Task fails without information about the reason.
  6. Zoomed annotations: last annotation is cropped (cropped.png).
  7. Zoomed annotations: maybe, this mode should be disabled if there are no annotations at all.
  8. Sequence details: try to export 1 char -> Message about long sequence.
  9. Sequence details: SVG and PNG have the same restrictions - 2978 characters. Is it correct?
  10. Try to export to a directory without writing rights -> Message about illegal characters in the path.
  11. What about graphs? There is no radio button for them.
  12. There is not the option "Selection" in the region combobox.
Comment by Eugenia Pushkova [X] (Inactive) [ 21/Jul/15 ]

Fix commits are: 10638 and 10665.

1..6 fixed
7 I don't think it is a good idea, the sequence looks differently in Zoom View. User should have an ability to get that image
8 fixed
9 Yes. QPainter limits work there
10 The message was changed
11 UGENE-4554
12 fixed

Also UGENE-4553 was created

Comment by German Grekhov [ 22/Jul/15 ]

Testing 2:
1. layout1.png is not fixed. The margin between the format combobox and the bottom groupbox line is 0px.
2. layout2.png and (2) is fixed bad (attached layout3.png).
3. Build dotplot for murine.gb -> Do double selection [2761..2772, 2803..2818] -> Export sequence details -> Message about too big region (selection.png).

Comment by Eugenia Pushkova [X] (Inactive) [ 22/Jul/15 ]

Additional fix in rev. 10685.

1. The margin was added
2. Dialog resize issues are ignored
3. Multi region selection was corrected

Comment by German Grekhov [ 29/Jul/15 ]

Testing 3:
Export of "Currently viewed" to SVG does not work. The output picture is a raster image, not vector.

Comment by German Grekhov [ 02/Aug/15 ]
  1. Removed PDF from the formats because the result of all 3 export areas for PDF is awful.
  2. Disabled SVG for the "Currently viewed" area. It should be described in the documentation.
Comment by Yuliya Algaer [ 18/Aug/15 ]

Layout changes bad on radio buttons click yet. See the 3434.png

Comment by Denis Kandrov [ 15/Jun/16 ]

Checked.

Comment by Yuliya Algaer [ 25/Jul/16 ]

Reviewed.

Generated at Thu Mar 28 20:05:22 NOVT 2024 using Jira 8.5.0#805000-sha1:facbf8be6a56ed8ab71dea158b6e159962506101.