Uploaded image for project: 'UGENE'
  1. UGENE
  2. UGENE-1704

UGENE cannot save/read Pfam annotations

    XMLWordPrintable

    Details

    • Type: Bug
    • Status: Closed
    • Priority: Critical
    • Resolution: Fixed
    • Affects Version/s: None
    • Fix Version/s: 1.12
    • Component/s: None
    • Labels:
    • Tests Type:
      Manual scenario

      Description

      1. Open lrr_test_new.gb
      2. Search HMM3 signals with LRR_4.hmm model
      3. Export document with annotations into genbank format. Do not add to the project
      4. Open the exported file with UGENE
      Expected state: all the annotations of the new file are identical to annotations of the old file
      Bug state: only the first annotations without qualifiers is opened
      Problem: the qualifier "HMM_model" is saved in multiple lines. The qualifier string must be written into one line or the genbank parser must be improved to read multiple qualifier lines

        Attachments

        1. LRR_4.hmm
          21 kB
          Yura Vaskin
        2. lrr_test_new.gb
          3 kB
          Yura Vaskin

          Issue Links

            Activity

              People

              Assignee:
              atiunov Aleksey Tiunov [X] (Inactive)
              Reporter:
              vaskin Yura Vaskin
              Assigned Tester:
              Kirill Rasputin
              Watchers:
              1 Start watching this issue

                Dates

                Created:
                Updated:
                Resolved: