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  1. UGENE
  2. UGENE-274

Problem with a query schema consisted of Smith-Waterman elements

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    Details

    • Type: Bug
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: 1.9.2
    • Fix Version/s: 1.9.3
    • Component/s: Basic-Nucl
    • Labels:
    • Affect Type:
      Userdefined

      Description

      The bug has been found by a user, see "http://ugene.unipro.ru/forum/YaBB.pl?num=1304454974".

      The "No matches found" warning is pop up when a query schema consists of many Smith-Waterman elements.

      The problem has been reproduced. Find the "smith-waterman_elements.uql" query schema in the attachment. When the schema is run for the "murine.gb" sequence, the matches are not found, but at least one match exists!

      Note that if the "Smith-Waterman7" element is deleted from the schema the match can be found by the Query Designer.

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            Assignee:
            pagolubev Petr Golubev
            Reporter:
            oigl Olga Golosova
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              Dates

              Created:
              Updated:
              Resolved: