Uploaded image for project: 'UGENE'
  1. UGENE
  2. UGENE-29

Run a muscle task in separate process leads to hang of this task and consuming 100% CPU time by ugene

    XMLWordPrintable

    Details

    • Type: Bug
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: 1.9.1
    • Fix Version/s: 1.9.2
    • Component/s: Basic-MSA
    • Affect Type:
      Userdefined

      Description

      1. Open in Ugene file "out.sam" from attached archive.
      2. Right click on alignment view, select Align->Align with MUSCLE...
      3. In the appeared dialog press button "Align".
      4. In the result task hangs on 49% and process ugeneui.exe consuming 100% CPU time.

      MUSCLE can not align the attached file due to lack of memory, so MUSCLE task not starting.

        Attachments

        1. out.7z
          1.44 MB
          Timur Tleukenov

          Activity

            People

            Assignee:
            konyaev Konyaev Leonid
            Reporter:
            timur Timur Tleukenov
            Watchers:
            0 Start watching this issue

              Dates

              Created:
              Updated:
              Resolved: