Uploaded image for project: 'UGENE'
  1. UGENE
  2. UGENE-5524

Improve work of "In Silico PCR" for a sequence with Ns

    XMLWordPrintable

    Details

    • Type: Improvement
    • Status: Closed
    • Priority: Major
    • Resolution: Won't Fix
    • Affects Version/s: None
    • Fix Version/s: None
    • Component/s: Basic-Nucl
    • Affect Type:
      Userdefined

      Description

      Character 'N' means any character. When a user have a scaffold with multiple contigs, the contigs are separated by several 'N' characters.

      So when the user execute "In Silico PCR", our algorithm finds primers on this subsequences of Ns.

      The algorithm should remove results which entirely consists of Ns and maybe some results with many Ns.

        Attachments

          Activity

            People

            Assignee:
            Unassigned
            Reporter:
            dkandrov Denis Kandrov
            Watchers:
            1 Start watching this issue

              Dates

              Created:
              Updated:
              Resolved: