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  1. UGENE
  2. UGENE-5867

SCF format doesn't save quality attribute

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    Details

    • Story Points:
      1
    • Tests Type:
      Functional/Unit
    • Epic Link:
    • Sprint:
      DEV-29-1
    • Affect Type:
      Userdefined

      Description

      A file of SCF format can store a sequence with a chromatogram. A chromatogram can have quality values. Currently the quality from the file is stored in the DNAChromatogram class, but for the correct sequence processing in the "Trim and map Sanger reads" workflow each sequence has to have the quality attribute.

        Attachments

        1. pFB12-CDK5RAP2-2_P1714027_033.scf
          99 kB
          Svetlana Samoilenko
        2. reference.gb
          19 kB
          Svetlana Samoilenko

          Activity

            People

            Assignee:
            atiunov Aleksey Tiunov [X] (Inactive)
            Reporter:
            atiunov Aleksey Tiunov [X] (Inactive)
            Assigned Tester:
            Eugenia Pushkova [X] (Inactive)
            Watchers:
            2 Start watching this issue

              Dates

              Created:
              Updated:
              Resolved: