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  1. UGENE
  2. UGENE-3978

Crash on short reads alignment

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    Details

    • Type: Bug
    • Status: Closed
    • Priority: Critical
    • Resolution: Fixed
    • Affects Version/s: None
    • Fix Version/s: 1.16.2, 1.17
    • Component/s: NGS
    • Labels:
    • Story Points:
      3
    • Tests Type:
      Manual scenario
    • Sprint:
      DEV-05/03/2015, DEV-20/03/2015, DEV-10/04/2015
    • Affect Type:
      Userdefined

      Description

      1. Use menu:

      {Tools->Align to reference->Align short reads}

      Expected state: "Align Sequencing Reads" dialog appeared
      2. Select "UGENE Genome Aligner" method in the dialog
      3. Set reference sequence: https://usegalaxy.org/library_common/ldda_info?library_id=f9ba60baa2e6ba6d&show_deleted=False&cntrller=library&folder_id=eb31df9eb78c50f3&use_panels=False&id=935e350f64eb748c
      4. Add any short reads
      5. Press "Start"
      Scenario 1:
      6. Cancel task
      Current state: UGENE crashes
      Scenario 2:
      6. Close UGENE
      Expected state: "Shutdown confirmation" dialog appeared
      7. Press "Ok"
      Current state: UGENE crashes

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              Assignee:
              ggrekhov German Grekhov
              Reporter:
              artyom_s Artyom Savchenko
              Assigned Tester:
              Ivan Protsyuk
              Watchers:
              3 Start watching this issue

                Dates

                Created:
                Updated:
                Resolved:

                  Time Tracking

                  Estimated:
                  Original Estimate - 4 hours
                  4h
                  Remaining:
                  Remaining Estimate - 4 hours
                  4h
                  Logged:
                  Time Spent - Not Specified
                  Not Specified